Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS11525

Experiment: 24hr PHYTO2 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	24hr PHYTO2 MOI 1
2,620,607	+		BPHYT_RS11520	0.40	-0.3
2,620,608	-		BPHYT_RS11520	0.40	-1.2
2,620,676	-		BPHYT_RS11520	0.45	-0.1
2,621,014	-		BPHYT_RS11520	0.69	-0.1
2,621,018	-		BPHYT_RS11520	0.70	-0.3
2,621,019	+		BPHYT_RS11520	0.70	+0.0
2,621,019	+		BPHYT_RS11520	0.70	-0.5
2,621,019	+		BPHYT_RS11520	0.70	-1.0
2,621,019	+		BPHYT_RS11520	0.70	-1.7
2,621,019	+		BPHYT_RS11520	0.70	+0.3
2,621,020	-		BPHYT_RS11520	0.70	+0.6
2,621,020	-		BPHYT_RS11520	0.70	+0.5
2,621,020	-		BPHYT_RS11520	0.70	-1.0
2,621,020	-		BPHYT_RS11520	0.70	+0.3
2,621,193	+		BPHYT_RS11520	0.82	-1.3
2,621,193	+		BPHYT_RS11520	0.82	+1.4
2,621,319	+				-1.0
2,621,320	-				+0.8
2,621,621	-				+1.1
2,621,639	+				-1.6
2,621,689	+				+0.1
2,621,689	+				-1.1
2,621,689	+				-2.6
2,621,741	-				-0.5
2,621,799	+				-2.6
2,621,799	+				-3.8
2,621,800	-				+0.0
2,621,844	-				+0.4
2,621,885	-				-0.2
2,621,925	-				+0.0
2,622,274	+		BPHYT_RS11530	0.84	-0.4
2,622,282	-		BPHYT_RS11530	0.86	+0.8
2,622,307	+				-0.6
2,622,308	-				-1.3
2,622,627	-				+0.4