Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS09775

Experiment: 24hr PHYTO2 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	24hr PHYTO2 MOI 1
2,216,812	-		BPHYT_RS09770	0.80	+0.2
2,216,812	-		BPHYT_RS09770	0.80	+0.2
2,217,572	+				+1.7
2,217,591	+				-2.1
2,217,694	+				+0.1
2,217,826	+				-0.9
2,217,827	-				+0.3
2,217,903	-				+0.1
2,217,904	+				-0.1
2,217,904	+				+0.4
2,218,293	-		BPHYT_RS09775	0.27	-0.3
2,218,329	-		BPHYT_RS09775	0.29	-0.3
2,218,461	-		BPHYT_RS09775	0.35	-2.8
2,219,019	-		BPHYT_RS09775	0.60	-0.4
2,219,067	-		BPHYT_RS09775	0.62	-0.1
2,219,358	-		BPHYT_RS09775	0.75	+0.2
2,219,469	-		BPHYT_RS09775	0.80	-0.6
2,219,492	+		BPHYT_RS09775	0.81	+0.3
2,219,493	-		BPHYT_RS09775	0.82	+0.8
2,219,953	-				+0.6
2,220,303	+		BPHYT_RS09780	0.22	+2.2
2,220,342	+		BPHYT_RS09780	0.25	-0.4
2,220,342	+		BPHYT_RS09780	0.25	-1.2
2,220,343	-		BPHYT_RS09780	0.25	-0.2
2,220,343	-		BPHYT_RS09780	0.25	+0.2
2,220,438	+		BPHYT_RS09780	0.32	+2.4
2,220,750	+		BPHYT_RS09780	0.53	+0.4