Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS09660

Experiment: 24hr PHYTO2 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	24hr PHYTO2 MOI 1
2,188,792	+		BPHYT_RS09655	0.55	-0.4
2,188,792	+		BPHYT_RS09655	0.55	+1.4
2,188,792	+		BPHYT_RS09655	0.55	-2.4
2,188,792	+		BPHYT_RS09655	0.55	+0.0
2,188,792	+		BPHYT_RS09655	0.55	-0.0
2,188,793	-		BPHYT_RS09655	0.55	-1.4
2,188,793	-		BPHYT_RS09655	0.55	-2.5
2,188,793	-		BPHYT_RS09655	0.55	-2.0
2,188,793	-		BPHYT_RS09655	0.55	+0.4
2,188,793	-		BPHYT_RS09655	0.55	+1.4
2,188,793	-		BPHYT_RS09655	0.55	+1.2
2,188,793	-		BPHYT_RS09655	0.55	-0.8
2,189,353	+				-1.2
2,189,359	-				-1.5
2,189,359	-				-1.0
2,189,782	+		BPHYT_RS09660	0.17	+0.4
2,189,782	+		BPHYT_RS09660	0.17	+1.1
2,189,786	-		BPHYT_RS09660	0.17	+0.3
2,189,849	-		BPHYT_RS09660	0.21	+0.5
2,189,864	-		BPHYT_RS09660	0.22	+1.3
2,189,951	-		BPHYT_RS09660	0.29	+1.7
2,190,094	+		BPHYT_RS09660	0.39	+0.4
2,190,145	+		BPHYT_RS09660	0.42	+1.5
2,190,145	+		BPHYT_RS09660	0.42	+0.5
2,190,146	-		BPHYT_RS09660	0.42	+0.7
2,190,146	-		BPHYT_RS09660	0.42	+1.8
2,190,146	-		BPHYT_RS09660	0.42	+1.2
2,190,355	+		BPHYT_RS09660	0.57	+1.1
2,190,475	-		BPHYT_RS09660	0.66	+1.5
2,190,475	-		BPHYT_RS09660	0.66	+1.4
2,190,478	+		BPHYT_RS09660	0.66	+1.6
2,190,479	-				+1.5
2,190,505	+		BPHYT_RS09660	0.68	+1.5
2,191,016	+				+0.0
2,191,016	+				+0.2
2,191,674	-		BPHYT_RS09665	0.51	-1.4
2,191,952	+		BPHYT_RS09665	0.75	-0.9