Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS09560

Experiment: 24hr PHYTO2 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	24hr PHYTO2 MOI 1
2,168,287	+		BPHYT_RS09555	0.65	+1.3
2,168,288	-		BPHYT_RS09555	0.65	-1.2
2,168,790	-				+1.3
2,169,047	+				-0.1
2,169,048	-				-0.6
2,169,369	-		BPHYT_RS09560	0.16	-0.2
2,169,734	-		BPHYT_RS09560	0.34	+0.0
2,170,113	+		BPHYT_RS09560	0.52	-0.6
2,170,490	+		BPHYT_RS09560	0.70	+1.0
2,170,491	-		BPHYT_RS09560	0.70	-0.7
2,170,938	-				-0.3
2,170,965	-				+1.4
2,171,122	+				+2.4
2,171,123	-				+0.0
2,171,195	+				-1.2
2,172,098	+		BPHYT_RS09565	0.75	+0.0