Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS08710

Experiment: 24hr PHYTO2 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	24hr PHYTO2 MOI 1
1,976,532	+				+0.2
1,976,685	-				-1.9
1,976,953	+		BPHYT_RS08705	0.63	-0.5
1,976,953	+		BPHYT_RS08705	0.63	+0.5
1,976,954	-		BPHYT_RS08705	0.64	+0.0
1,976,980	+		BPHYT_RS08705	0.72	-0.2
1,977,011	-		BPHYT_RS08705	0.82	+0.8
1,977,047	-				-1.2
1,977,059	-				-0.7
1,977,064	+				-0.0
1,977,065	-				-0.8
1,977,070	+				-1.0
1,977,314	+				-0.4
1,977,314	+				+0.0
1,977,314	+				+1.8
1,977,373	-				+0.5
1,977,392	-				-0.9
1,977,483	-				+1.0
1,977,483	-				+2.3
1,977,937	-		BPHYT_RS08710	0.28	-0.9
1,978,153	-		BPHYT_RS08710	0.41	-1.0
1,978,468	-		BPHYT_RS08710	0.61	+0.0
1,978,566	+		BPHYT_RS08710	0.67	+1.3
1,978,567	-		BPHYT_RS08710	0.67	-1.5
1,978,701	+		BPHYT_RS08710	0.76	-0.5
1,978,701	+		BPHYT_RS08710	0.76	+0.0
1,978,702	-		BPHYT_RS08710	0.76	-1.2
1,978,725	+		BPHYT_RS08710	0.77	-2.9
1,978,728	+		BPHYT_RS08710	0.77	-1.6
1,978,737	+		BPHYT_RS08710	0.78	-0.7
1,978,801	-		BPHYT_RS08710	0.82	-1.8
1,978,947	+				-0.9
1,978,948	-				+0.8
1,979,422	-		BPHYT_RS08715	0.63	-0.7
1,979,457	-		BPHYT_RS08715	0.69	-0.9
1,980,020	-		BPHYT_RS08720	0.39	-0.0