Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS07150
Experiment: 24hr PHYTO2 MOI 1
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | 24hr PHYTO2 MOI 1 |
---|---|---|---|---|---|
remove | |||||
1,619,684 | - | -2.4 | |||
1,620,105 | + | BPHYT_RS07145 | 0.80 | +0.9 | |
1,621,117 | - | BPHYT_RS07150 | 0.22 | -1.8 | |
1,621,411 | - | BPHYT_RS07150 | 0.32 | +1.1 | |
1,621,767 | - | BPHYT_RS07150 | 0.45 | +0.5 | |
1,622,170 | - | BPHYT_RS07150 | 0.60 | +0.7 | |
1,622,172 | - | BPHYT_RS07150 | 0.60 | -0.6 | |
1,622,187 | - | BPHYT_RS07150 | 0.61 | -0.2 | |
1,622,388 | + | BPHYT_RS07150 | 0.68 | -0.4 | |
1,622,802 | + | BPHYT_RS07150 | 0.83 | +0.9 | |
1,623,124 | - | -0.1 | |||
1,623,366 | - | -0.5 | |||
1,624,051 | - | BPHYT_RS07155 | 0.26 | -1.1 |
Or see this region's nucleotide sequence