Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS05920

Experiment: 24hr PHYTO2 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	24hr PHYTO2 MOI 1
1,342,120	+				-0.1
1,342,120	+				-2.6
1,342,121	-				-1.0
1,342,181	-				+0.3
1,342,195	+				+0.2
1,342,196	-				-0.4
1,342,415	-				-0.4
1,342,415	-				-1.4
1,342,415	-				+2.3
1,342,426	+				+0.2
1,342,528	+				-0.5
1,342,529	-				-0.6
1,342,689	+		BPHYT_RS05915	0.66	-0.2
1,342,689	+		BPHYT_RS05915	0.66	-0.9
1,342,689	+		BPHYT_RS05915	0.66	+0.2
1,342,690	-		BPHYT_RS05915	0.67	+0.3
1,342,723	+		BPHYT_RS05915	0.84	-2.8
1,342,724	-		BPHYT_RS05915	0.84	-1.4
1,342,725	+		BPHYT_RS05915	0.85	-0.3
1,342,726	-		BPHYT_RS05915	0.85	+2.4
1,342,726	-		BPHYT_RS05915	0.85	+1.0
1,342,726	-		BPHYT_RS05915	0.85	+0.1
1,342,769	-				+0.2
1,342,827	+				+0.2
1,342,878	+				-0.1
1,342,879	-				-0.2
1,342,935	+				-0.3
1,342,935	+				+0.1
1,342,936	-				+0.0
1,342,936	-				+0.4
1,342,936	-				+0.1
1,343,436	+		BPHYT_RS05920	0.89	-0.8
1,343,437	-		BPHYT_RS05920	0.89	-1.5
1,343,437	-		BPHYT_RS05920	0.89	-1.9
1,343,478	+				+0.3
1,343,593	-				-1.3
1,343,593	-				-3.0
1,343,671	-				-0.7
1,343,868	+		BPHYT_RS05925	0.11	+0.0
1,343,869	-		BPHYT_RS05925	0.11	+1.6
1,343,962	-		BPHYT_RS05925	0.15	+0.1
1,344,394	-		BPHYT_RS05925	0.38	-0.7