Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS05305

Experiment: 24hr PHYTO2 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	24hr PHYTO2 MOI 1
1,220,818	+		BPHYT_RS05290	0.86	-0.0
1,220,819	-		BPHYT_RS05290	0.86	+1.1
1,221,035	+		BPHYT_RS05295	0.46	+0.4
1,221,359	-		BPHYT_RS05300	0.10	-1.9
1,221,359	-		BPHYT_RS05300	0.10	-0.1
1,221,387	-		BPHYT_RS05300	0.17	+0.1
1,221,472	-		BPHYT_RS05300	0.38	-0.4
1,221,670	-		BPHYT_RS05300	0.87	-1.5
1,221,691	-				+0.3
1,221,693	-				-1.2
1,221,766	+				-0.9
1,221,845	-				+0.0
1,222,318	-		BPHYT_RS05305	0.55	-1.5
1,222,983	-				-0.5
1,222,984	+				-0.8
1,223,230	-		BPHYT_RS05310	0.27	-2.3
1,223,348	-		BPHYT_RS05310	0.40	-0.3
1,223,348	-		BPHYT_RS05310	0.40	-1.0
1,223,404	+		BPHYT_RS05310	0.46	-1.0
1,223,692	-		BPHYT_RS05310	0.77	+0.4
1,223,702	+		BPHYT_RS05310	0.79	+0.3
1,223,703	-		BPHYT_RS05310	0.79	-0.5
1,223,703	-		BPHYT_RS05310	0.79	-0.5
1,223,706	-		BPHYT_RS05310	0.79	-0.3
1,223,706	-		BPHYT_RS05310	0.79	+0.5