Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS05150

Experiment: 24hr PHYTO2 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	24hr PHYTO2 MOI 1
1,187,185	+		BPHYT_RS05145	0.41	+0.7
1,187,185	+		BPHYT_RS05145	0.41	-0.4
1,187,507	-		BPHYT_RS05145	0.74	-0.9
1,187,511	-		BPHYT_RS05145	0.75	+0.8
1,187,530	+		BPHYT_RS05145	0.77	+1.0
1,188,169	+				+0.5
1,188,169	+				-1.5
1,188,170	-				-1.4
1,188,173	+				-2.1
1,188,174	-				-0.8
1,188,303	-		BPHYT_RS05150	0.18	-1.9
1,188,304	+		BPHYT_RS05150	0.18	-0.9
1,188,304	+		BPHYT_RS05150	0.18	+0.1
1,188,304	+		BPHYT_RS05150	0.18	-1.0
1,188,305	-		BPHYT_RS05150	0.18	+1.0
1,188,305	-		BPHYT_RS05150	0.18	+0.3
1,188,305	-		BPHYT_RS05150	0.18	-1.2
1,188,497	+		BPHYT_RS05150	0.43	-1.0
1,188,498	-		BPHYT_RS05150	0.43	-0.3
1,188,548	+		BPHYT_RS05150	0.49	-0.0
1,188,549	-		BPHYT_RS05150	0.49	+0.2
1,188,549	-		BPHYT_RS05150	0.49	+0.7
1,188,549	-		BPHYT_RS05150	0.49	-0.1
1,188,549	-				-1.3
1,188,690	-		BPHYT_RS05150	0.67	-1.2
1,188,716	+		BPHYT_RS05150	0.71	-1.4
1,188,894	-				-0.1
1,189,114	-				+1.1
1,189,114	-				+2.2
1,189,212	-		BPHYT_RS05155	0.12	+1.4
1,189,236	+		BPHYT_RS05155	0.17	+1.1
1,189,237	-		BPHYT_RS05155	0.17	+1.8
1,189,518	+		BPHYT_RS05155	0.70	+0.8
1,189,518	+		BPHYT_RS05155	0.70	+1.8
1,189,560	+		BPHYT_RS05155	0.78	+1.7
1,189,561	-		BPHYT_RS05155	0.78	+2.2
1,189,901	+				-0.6
1,189,902	-				+0.7