Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS04365

Experiment: 24hr PHYTO2 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	24hr PHYTO2 MOI 1
1,005,114	+				-2.3
1,005,159	+		BPHYT_RS04365	0.12	-1.6
1,005,159	+		BPHYT_RS04365	0.12	-1.5
1,005,160	-		BPHYT_RS04365	0.13	-0.7
1,005,160	-		BPHYT_RS04365	0.13	-1.0
1,005,160	-		BPHYT_RS04365	0.13	-2.2
1,005,187	+		BPHYT_RS04365	0.14	-1.4
1,005,190	-		BPHYT_RS04365	0.15	-2.1
1,005,190	-		BPHYT_RS04365	0.15	-1.9
1,005,432	+		BPHYT_RS04365	0.32	-3.8
1,005,432	+		BPHYT_RS04365	0.32	-0.3
1,005,490	-		BPHYT_RS04365	0.36	-2.6
1,005,507	+		BPHYT_RS04365	0.37	-2.1
1,005,508	+		BPHYT_RS04365	0.37	-1.9
1,005,508	-		BPHYT_RS04365	0.37	-1.3
1,005,511	-		BPHYT_RS04365	0.37	-2.9
1,005,697	-		BPHYT_RS04365	0.50	+0.3
1,005,772	+		BPHYT_RS04365	0.56	-2.6
1,005,772	+		BPHYT_RS04365	0.56	-1.7
1,005,772	+		BPHYT_RS04365	0.56	-2.7
1,005,772	+		BPHYT_RS04365	0.56	-1.3
1,005,773	-		BPHYT_RS04365	0.56	-2.3
1,005,939	+		BPHYT_RS04365	0.67	-1.9
1,005,940	-		BPHYT_RS04365	0.67	-1.2
1,005,940	-		BPHYT_RS04365	0.67	-1.3
1,005,940	-		BPHYT_RS04365	0.67	-2.7
1,006,030	+		BPHYT_RS04365	0.74	-1.1
1,006,031	-		BPHYT_RS04365	0.74	-3.2
1,006,299	+				-2.0
1,006,299	+				-3.2
1,006,326	+				-3.2
1,006,520	-				-0.9
1,006,524	+				-3.5
1,006,552	+				-2.2
1,006,553	-				+0.2
1,006,600	-				-0.2
1,006,602	+				-2.9
1,006,603	-				+0.1
1,006,603	-				+0.9
1,006,633	+				-3.2
1,006,634	-				-0.4
1,006,671	+				-1.1
1,006,765	+				-2.0
1,006,765	+				-1.6
1,006,780	+				-2.3
1,007,079	+		BPHYT_RS04370	0.35	+3.3