Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS03655
Experiment: 24hr PHYTO2 MOI 1
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | 24hr PHYTO2 MOI 1 |
---|---|---|---|---|---|
remove | |||||
830,748 | - | BPHYT_RS03650 | 0.83 | -0.5 | |
831,019 | - | +1.6 | |||
831,109 | + | +0.0 | |||
831,110 | - | -1.8 | |||
831,152 | + | -1.4 | |||
831,192 | + | -0.5 | |||
831,193 | - | -0.9 | |||
831,293 | - | -1.5 | |||
831,318 | + | -2.0 | |||
831,567 | - | BPHYT_RS03655 | 0.39 | -0.3 | |
831,833 | + | BPHYT_RS03655 | 0.79 | -2.6 | |
831,983 | - | -0.0 | |||
832,211 | + | BPHYT_RS03660 | 0.13 | -0.8 | |
832,416 | - | BPHYT_RS03660 | 0.38 | -0.7 | |
832,416 | - | BPHYT_RS03660 | 0.38 | +0.2 | |
832,416 | - | BPHYT_RS03660 | 0.38 | +2.6 | |
832,416 | - | BPHYT_RS03660 | 0.38 | -0.1 | |
832,426 | - | BPHYT_RS03660 | 0.39 | -0.2 | |
832,745 | + | BPHYT_RS03660 | 0.78 | +0.2 | |
832,974 | + | +0.5 |
Or see this region's nucleotide sequence