Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS03590
Experiment: 24hr PHYTO2 MOI 1
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | 24hr PHYTO2 MOI 1 |
---|---|---|---|---|---|
remove | |||||
814,354 | + | -0.9 | |||
814,355 | - | -0.8 | |||
814,493 | - | +1.4 | |||
814,505 | - | +0.5 | |||
814,508 | + | -0.9 | |||
814,508 | + | +1.5 | |||
814,508 | + | +0.3 | |||
814,508 | + | +0.6 | |||
814,509 | - | -0.4 | |||
814,510 | + | -0.4 | |||
814,511 | - | -2.8 | |||
814,617 | + | -0.6 | |||
814,741 | + | +2.0 | |||
814,741 | + | -0.5 | |||
814,741 | + | +1.4 | |||
814,741 | + | -0.6 | |||
814,741 | + | -0.8 | |||
816,928 | + | -1.1 | |||
816,928 | + | -0.2 |
Or see this region's nucleotide sequence