Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS00170

Experiment: 24hr PHYTO2 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	24hr PHYTO2 MOI 1
44,059	+				-2.0
44,059	+				-1.9
44,129	+				-1.0
44,130	-				-0.7
44,133	+				-0.2
44,155	+				+0.4
44,163	+				-1.2
44,178	+				-0.6
44,302	-		BPHYT_RS00165	0.14	+0.2
44,362	-		BPHYT_RS00165	0.21	+0.8
44,847	+		BPHYT_RS00165	0.79	-0.1
44,868	+		BPHYT_RS00165	0.81	-0.7
44,868	+		BPHYT_RS00165	0.81	+0.2
44,893	-		BPHYT_RS00165	0.84	-2.8
44,893	-		BPHYT_RS00165	0.84	-1.3
45,016	-				-1.5
45,065	+				+0.9
45,200	+		BPHYT_RS00170	0.26	-1.0
45,201	-		BPHYT_RS00170	0.26	-2.0
45,315	-		BPHYT_RS00170	0.45	-0.0
45,380	+		BPHYT_RS00170	0.56	+0.2
45,390	-		BPHYT_RS00170	0.58	-0.1
45,571	-				+0.0
45,571	-		BPHYT_RS00170	0.89	-0.1
45,625	+				-0.4
45,626	-				-0.7
45,626	-				-1.0
45,626	-				-0.3
45,650	-				+0.4
45,706	-				+1.1
45,706	-				+0.1
45,855	-				+1.1
45,995	+				-0.2
46,036	+				+0.8
46,042	-				+0.5
46,085	+				-0.5
46,086	-				-1.5
46,106	+				+1.3
46,107	-				-0.2
46,125	+				-0.4
46,136	-				+0.3
46,137	+				-0.1
46,138	-				+0.4
46,138	-				-0.5
46,146	+				+0.5
46,156	-				-0.7
46,187	+				-1.6
46,359	-				-0.2
46,376	+				-0.8
46,377	-				+0.2
46,383	-				-0.4
46,401	+				+0.0
46,401	+				+0.5
46,401	+				+0.3
46,401	+				-1.5
46,471	+				+0.3
46,567	+				-0.7
46,567	+				+0.3
46,603	+				+0.0
46,603	+				-2.0
46,604	-				-0.8
46,604	-				+0.8
46,604	-				+0.2
46,604	-				+0.5