Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS33310

Experiment: 24hr PHYTO1 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	24hr PHYTO1 MOI 1
3,054,708	+		BPHYT_RS33305	0.53	+1.2
3,054,708	+		BPHYT_RS33305	0.53	-0.5
3,054,709	-		BPHYT_RS33305	0.53	-1.5
3,055,155	+		BPHYT_RS33305	0.77	-0.5
3,055,476	+				+0.8
3,055,699	-				+0.6
3,055,760	+				-1.3
3,055,761	-				-0.6
3,055,930	+		BPHYT_RS33310	0.26	+1.0
3,055,982	-		BPHYT_RS33310	0.32	+0.6
3,056,065	-		BPHYT_RS33310	0.40	+1.9
3,056,102	+		BPHYT_RS33310	0.44	+3.3
3,056,103	-		BPHYT_RS33310	0.44	+0.8
3,056,188	+		BPHYT_RS33310	0.53	-0.4
3,056,188	+		BPHYT_RS33310	0.53	+0.7
3,056,189	-		BPHYT_RS33310	0.53	-0.3
3,056,413	+		BPHYT_RS33310	0.76	+0.5
3,056,414	-		BPHYT_RS33310	0.76	-0.0
3,056,646	-				+0.0
3,056,652	+				+0.1
3,056,658	-				-0.1
3,056,730	+				-0.5
3,056,731	-				-1.2
3,056,773	+				-0.5
3,056,774	-				-0.3
3,056,818	+				-0.0
3,056,818	+				-0.9
3,056,840	+		BPHYT_RS33315	0.12	-0.4
3,056,873	+		BPHYT_RS33315	0.16	+0.7
3,056,895	-		BPHYT_RS33315	0.19	+1.5
3,056,982	+		BPHYT_RS33315	0.32	-0.2
3,056,994	-		BPHYT_RS33315	0.33	-0.7
3,057,051	-		BPHYT_RS33315	0.41	+0.4
3,057,456	-				-0.1
3,057,631	-				-0.5