Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS33300

Experiment: 24hr PHYTO1 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	24hr PHYTO1 MOI 1
3,052,310	-				+0.3
3,052,402	+		BPHYT_RS33300	0.16	-0.3
3,052,402	+		BPHYT_RS33300	0.16	+0.1
3,052,402	+		BPHYT_RS33300	0.16	+0.2
3,052,403	-		BPHYT_RS33300	0.16	-0.2
3,052,672	+		BPHYT_RS33300	0.40	-1.0
3,052,727	+		BPHYT_RS33300	0.45	-2.2
3,053,351	+				-2.6
3,053,467	+				-0.1
3,053,491	-				+0.9
3,053,507	+				-2.7
3,053,507	+				-0.1
3,053,554	+				+0.8
3,053,554	+				-0.7
3,053,575	+				-1.6
3,053,926	+		BPHYT_RS33305	0.12	-0.3
3,053,994	+		BPHYT_RS33305	0.16	-0.8
3,053,995	-		BPHYT_RS33305	0.16	-1.4