Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS32475

Experiment: 24hr PHYTO1 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	24hr PHYTO1 MOI 1
2,857,323	+		BPHYT_RS32465	0.67	-0.1
2,857,323	+		BPHYT_RS32465	0.67	+3.3
2,857,324	-		BPHYT_RS32465	0.67	-0.6
2,857,550	-		BPHYT_RS32465	0.89	+0.7
2,857,680	-				+0.2
2,857,725	+		BPHYT_RS32470	0.40	-0.6
2,857,773	-		BPHYT_RS32470	0.76	-0.7
2,857,897	-				-0.4
2,857,915	+				-0.0
2,859,057	+		BPHYT_RS32475	0.72	-0.9
2,859,058	-		BPHYT_RS32475	0.72	+1.4
2,859,058	-		BPHYT_RS32475	0.72	+1.2
2,859,203	-		BPHYT_RS32475	0.81	-0.4
2,859,544	+				-0.3
2,859,545	-				-0.8
2,859,545	-				-0.1
2,859,583	-				-2.6
2,859,607	+				+0.0
2,859,607	+				+0.0
2,859,608	-				-0.3
2,859,608	-				-0.4
2,859,614	-				+0.1
2,859,709	-				-1.7
2,859,749	-				-2.0
2,860,116	+		BPHYT_RS32485	0.10	-1.2
2,860,116	+		BPHYT_RS32485	0.10	-1.4
2,860,117	-		BPHYT_RS32485	0.10	-0.2
2,860,281	+		BPHYT_RS32485	0.21	+1.6