Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS32190

Experiment: 24hr PHYTO1 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	24hr PHYTO1 MOI 1
2,794,705	+		BPHYT_RS32185	0.60	+0.8
2,794,880	-		BPHYT_RS32185	0.67	-0.8
2,794,895	-		BPHYT_RS32185	0.67	-1.0
2,794,895	-		BPHYT_RS32185	0.67	-0.0
2,794,895	-		BPHYT_RS32185	0.67	-0.3
2,795,180	-		BPHYT_RS32185	0.79	-0.2
2,795,223	+		BPHYT_RS32185	0.81	-0.0
2,795,335	+		BPHYT_RS32185	0.85	+0.2
2,795,336	-		BPHYT_RS32185	0.85	-0.4
2,795,587	+				+0.2
2,795,798	+		BPHYT_RS32190	0.27	-1.0
2,796,021	+				-1.2
2,796,025	-				-0.5
2,796,025	-				-0.3
2,796,601	+		BPHYT_RS32200	0.24	-1.1
2,796,657	-		BPHYT_RS32200	0.32	+1.4