Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS24630

Experiment: 24hr PHYTO1 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	24hr PHYTO1 MOI 1
1,095,224	+		BPHYT_RS24625	0.21	+0.0
1,095,224	+		BPHYT_RS24625	0.21	-3.2
1,095,394	-		BPHYT_RS24625	0.64	-0.3
1,095,542	-				-1.0
1,095,542	-				+0.1
1,095,579	+				+1.2
1,095,624	+				-1.4
1,095,625	-				+1.5
1,095,671	-				-0.6
1,095,838	-				-1.0
1,095,844	-				-0.4
1,096,124	-		BPHYT_RS24630	0.39	+0.9
1,096,357	-		BPHYT_RS24630	0.90	+1.6
1,096,357	-		BPHYT_RS24630	0.90	+0.8
1,096,357	-		BPHYT_RS24630	0.90	-0.1
1,096,666	-		BPHYT_RS24635	0.12	+0.1
1,096,721	-		BPHYT_RS24635	0.14	-0.6