Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS15320

Experiment: 24hr PHYTO1 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	24hr PHYTO1 MOI 1
3,479,309	+				+2.3
3,479,310	-				-1.4
3,479,310	-				+1.5
3,479,310	-				-0.6
3,479,310	-				-1.1
3,479,310	-				+0.5
3,479,310	-				+0.0
3,479,310	-				-0.1
3,480,034	-				+0.7
3,480,263	-		BPHYT_RS15320	0.25	+0.5
3,480,274	-		BPHYT_RS15320	0.26	+1.5
3,480,274	-		BPHYT_RS15320	0.26	+1.3
3,480,274	-		BPHYT_RS15320	0.26	-0.5
3,480,949	-				+0.2
3,480,949	-				+0.2
3,480,959	-				+0.3
3,481,048	-				-0.4
3,481,064	+				-0.5
3,481,065	-				+1.3
3,481,367	+		BPHYT_RS15325	0.27	-1.0
3,481,652	+		BPHYT_RS15325	0.66	+0.7
3,481,680	-		BPHYT_RS15325	0.69	+0.6
3,481,680	-		BPHYT_RS15325	0.69	+1.3
3,481,858	+				-0.8
3,481,858	+				+0.6
3,481,859	-				+0.9