Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS15075

Experiment: 24hr PHYTO1 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	24hr PHYTO1 MOI 1
3,429,387	+		BPHYT_RS15070	0.68	+0.5
3,429,388	-		BPHYT_RS15070	0.69	-0.3
3,429,573	-		BPHYT_RS15070	0.82	-0.9
3,429,638	+		BPHYT_RS15070	0.87	-1.5
3,429,851	+				-0.1
3,429,852	-				-1.5
3,429,858	+				-0.0
3,429,870	-				+0.3
3,429,894	+				+0.7
3,430,034	-		BPHYT_RS15075	0.18	+0.3
3,430,220	-		BPHYT_RS15075	0.54	+2.3
3,430,220	-		BPHYT_RS15075	0.54	+0.3
3,430,667	-				-0.4
3,430,670	+				-1.4
3,430,671	-				-0.3
3,430,671	-				-0.7
3,430,730	+				-0.6
3,430,730	+				+0.0
3,430,730	+				+0.5
3,430,731	-				-0.2
3,430,731	-				+0.0
3,430,731	-				-0.1
3,430,735	+				+0.9
3,430,736	+				-0.3
3,430,736	+				-0.2
3,430,737	-				-2.0
3,430,737	-				-0.9
3,430,760	+				+0.4
3,430,760	+				-0.5
3,431,070	+		BPHYT_RS15080	0.20	-0.8