Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS14295

Experiment: 24hr PHYTO1 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	24hr PHYTO1 MOI 1
3,265,289	+		BPHYT_RS14290	0.77	+0.0
3,265,289	+		BPHYT_RS14290	0.77	-0.7
3,265,289	+		BPHYT_RS14290	0.77	-0.0
3,265,290	-		BPHYT_RS14290	0.77	-0.9
3,265,290	-		BPHYT_RS14290	0.77	-0.6
3,265,438	+				+0.2
3,265,438	+				+0.6
3,265,439	-				+0.1
3,265,448	-				+0.1
3,265,448	-				-0.1
3,265,448	-				-0.6
3,265,561	+				+0.7
3,265,561	+				-0.4
3,265,561	+				-0.9
3,265,561	+				-0.7
3,265,561	+				+0.1
3,265,561	+				-0.2
3,265,562	-				-1.3
3,265,562	-				-1.0
3,265,562	-				-0.2
3,265,563	+				-0.1
3,265,563	+				+0.6
3,265,563	+				+0.6
3,265,564	-				+0.4
3,265,564	-				-0.6
3,265,564	-				-0.1
3,265,703	+				+0.0
3,265,703	+				+1.9
3,265,704	-				-0.0
3,266,027	-		BPHYT_RS14295	0.43	+0.4
3,266,027	-		BPHYT_RS14295	0.43	+0.0
3,266,054	-		BPHYT_RS14295	0.46	-0.0
3,266,075	+		BPHYT_RS14295	0.49	-1.9
3,266,081	+		BPHYT_RS14295	0.50	+0.8
3,266,360	+		BPHYT_RS14295	0.87	-0.3
3,266,361	-		BPHYT_RS14295	0.87	-1.1
3,266,361	-		BPHYT_RS14295	0.87	-0.8
3,266,452	+				+1.3
3,266,452	+				+0.6
3,266,452	+				+1.7
3,266,452	+				-0.4
3,266,453	-				+1.1
3,266,456	+				+0.3
3,266,456	+				-0.5
3,266,457	-				+0.5
3,266,457	-				-0.5
3,266,598	-				+3.6
3,266,598	-				+0.7
3,266,603	+				-1.3
3,266,653	+				+0.1
3,266,660	+				-0.4
3,266,661	-				-1.3
3,266,853	+				-0.6
3,266,853	+				+1.0
3,266,859	-				+0.3
3,266,972	+				+2.3
3,266,973	-				+0.2
3,267,177	-				-0.2