Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS11685
Experiment: 24hr PHYTO1 MOI 1
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | 24hr PHYTO1 MOI 1 |
---|---|---|---|---|---|
remove | |||||
2,649,854 | - | +0.2 | |||
2,649,944 | + | +0.8 | |||
2,649,944 | + | +2.2 | |||
2,650,171 | - | -0.1 | |||
2,650,727 | - | -1.9 | |||
2,650,902 | + | BPHYT_RS11685 | 0.23 | -2.4 | |
2,651,662 | + | BPHYT_RS11690 | 0.46 | +0.1 | |
2,651,784 | - | -0.6 | |||
2,651,804 | - | +1.1 | |||
2,651,900 | - | -1.1 | |||
2,652,024 | + | +0.0 | |||
2,652,075 | + | +0.0 |
Or see this region's nucleotide sequence