Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS11190

Experiment: 24hr PHYTO1 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	24hr PHYTO1 MOI 1
2,541,257	+		BPHYT_RS11185	0.35	-0.5
2,541,257	+		BPHYT_RS11185	0.35	-0.6
2,541,258	-		BPHYT_RS11185	0.35	+0.7
2,541,381	-		BPHYT_RS11185	0.45	-0.8
2,541,708	-		BPHYT_RS11185	0.70	+1.6
2,541,996	-				-0.3
2,542,100	+				+0.4
2,542,104	-				-1.8
2,542,269	+				-0.6
2,542,272	-				+2.8
2,542,386	-				-2.0
2,542,620	-		BPHYT_RS11190	0.21	+2.2
2,542,746	-		BPHYT_RS11190	0.28	+0.1
2,542,802	+		BPHYT_RS11190	0.31	-1.5
2,542,802	+		BPHYT_RS11190	0.31	-1.8
2,542,802	+		BPHYT_RS11190	0.31	+0.2
2,542,803	-		BPHYT_RS11190	0.31	+1.3
2,542,929	-		BPHYT_RS11190	0.37	-0.0
2,542,937	+		BPHYT_RS11190	0.38	+1.0
2,543,411	+		BPHYT_RS11190	0.62	+0.3
2,543,411	+		BPHYT_RS11190	0.62	-0.2
2,543,435	+		BPHYT_RS11190	0.64	-0.2
2,543,861	+		BPHYT_RS11190	0.86	-1.7
2,544,122	+				-0.9
2,544,154	-				-0.1
2,544,238	+				+0.2
2,544,307	+				+0.9
2,544,467	-				+1.1
2,544,467	-				+0.2
2,544,622	+				+1.6
2,544,623	-				-2.1
2,544,734	+				+0.1
2,544,843	+				-0.3
2,544,851	+				+0.0
2,544,952	+				-1.7
2,544,953	-				+0.1
2,544,953	-				+2.2
2,545,094	-		BPHYT_RS11195	0.13	-0.2
2,545,096	+		BPHYT_RS11195	0.13	-0.3