Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS04605

Experiment: 24hr PHYTO1 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	24hr PHYTO1 MOI 1
1,065,641	+		BPHYT_RS04600	0.60	+0.9
1,065,642	-		BPHYT_RS04600	0.61	+1.5
1,065,737	-		BPHYT_RS04600	0.66	-0.9
1,065,750	-		BPHYT_RS04600	0.66	-0.3
1,065,819	-		BPHYT_RS04600	0.70	+0.4
1,065,819	-		BPHYT_RS04600	0.70	-0.0
1,066,013	+		BPHYT_RS04600	0.80	-1.9
1,066,014	-		BPHYT_RS04600	0.80	+0.6
1,066,291	-				+0.5
1,066,642	-		BPHYT_RS04605	0.24	-0.1
1,066,642	-		BPHYT_RS04605	0.24	-1.1
1,066,652	+		BPHYT_RS04605	0.25	+0.5
1,066,740	+		BPHYT_RS04605	0.34	+1.7
1,066,740	+		BPHYT_RS04605	0.34	-1.0
1,066,792	+		BPHYT_RS04605	0.39	-0.0
1,066,867	+		BPHYT_RS04605	0.46	-0.8
1,066,867	+		BPHYT_RS04605	0.46	-0.0
1,066,867	+		BPHYT_RS04605	0.46	-0.7
1,066,868	-		BPHYT_RS04605	0.46	-0.1
1,067,078	-		BPHYT_RS04605	0.66	-0.5
1,067,078	-		BPHYT_RS04605	0.66	-0.5
1,067,078	-		BPHYT_RS04605	0.66	+0.5
1,067,184	+		BPHYT_RS04605	0.76	-0.9
1,067,194	+		BPHYT_RS04605	0.77	+0.1
1,067,195	-		BPHYT_RS04605	0.77	-0.4
1,067,195	-		BPHYT_RS04605	0.77	-0.3
1,067,498	-				+0.6
1,067,612	+		BPHYT_RS04610	0.11	+0.3
1,067,612	+		BPHYT_RS04610	0.11	+0.3
1,068,194	+		BPHYT_RS04610	0.63	-0.9
1,068,195	-		BPHYT_RS04610	0.64	-1.3