Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS04590

Experiment: 24hr PHYTO1 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	24hr PHYTO1 MOI 1
1,062,391	+				-0.1
1,062,391	+				+0.8
1,062,391	+				-0.3
1,062,571	-				+0.7
1,062,608	-				-1.0
1,062,648	+				-0.1
1,062,688	+				-0.3
1,062,688	+				-0.0
1,062,688	+				-1.8
1,062,689	-				+0.1
1,062,825	+		BPHYT_RS04585	0.12	-0.1
1,063,170	-		BPHYT_RS04590	0.11	+1.5
1,063,216	+		BPHYT_RS04590	0.16	-1.1
1,063,217	-		BPHYT_RS04590	0.16	-0.1
1,063,217	-		BPHYT_RS04590	0.16	-0.2
1,063,217	-		BPHYT_RS04590	0.16	+0.3
1,063,220	+		BPHYT_RS04590	0.16	-1.0
1,063,221	-		BPHYT_RS04590	0.16	+1.0
1,063,221	-		BPHYT_RS04590	0.16	+1.2
1,063,221	-		BPHYT_RS04590	0.16	+0.2
1,063,376	-		BPHYT_RS04590	0.34	-0.3
1,063,400	-		BPHYT_RS04590	0.37	-0.0
1,063,571	-		BPHYT_RS04590	0.57	-2.2
1,063,646	-		BPHYT_RS04590	0.65	+1.5
1,064,318	-		BPHYT_RS04595	0.69	-0.3
1,064,363	+		BPHYT_RS04595	0.78	-0.0
1,064,364	-		BPHYT_RS04595	0.78	-1.2
1,064,520	-				-1.1
1,064,523	-				+0.1
1,064,540	+				-0.4
1,064,540	+				-0.6
1,064,540	+				-0.9
1,064,541	-				-0.5
1,064,541	-				-0.5
1,064,541	-				-0.7
1,064,544	+				-1.6
1,064,545	-				-0.5
1,064,724	+		BPHYT_RS04600	0.12	-0.4
1,064,744	+		BPHYT_RS04600	0.13	-0.5
1,064,744	+		BPHYT_RS04600	0.13	+1.1
1,064,744	+		BPHYT_RS04600	0.13	-0.0
1,064,745	-		BPHYT_RS04600	0.13	+0.3
1,064,745	-		BPHYT_RS04600	0.13	+0.4
1,064,745	-		BPHYT_RS04600	0.13	+0.7
1,064,745	-		BPHYT_RS04600	0.13	+0.1
1,064,783	+		BPHYT_RS04600	0.15	-2.6
1,064,784	-		BPHYT_RS04600	0.15	-0.7