Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS01340

Experiment: 24hr PHYTO1 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	24hr PHYTO1 MOI 1
305,924	+				-1.5
305,924	+				+1.0
305,925	-				+0.5
305,925	-				+0.6
305,925	-				-0.4
305,925	-				-1.5
306,062	+				-0.3
306,199	+				-1.7
306,200	-				-0.2
306,227	+				-1.4
306,228	-				+0.6
306,466	+				+0.3
306,467	-				-0.9
306,468	+				+0.3
306,469	-				+0.9
306,480	+				-0.0
306,712	+				-0.9
306,713	-				-1.2
306,897	-				-0.2
306,968	+		BPHYT_RS01340	0.18	+2.3
307,223	+		BPHYT_RS01340	0.63	+1.5
307,223	+		BPHYT_RS01340	0.63	+1.3
307,367	+		BPHYT_RS01340	0.89	+0.7
307,367	+		BPHYT_RS01340	0.89	+0.7
307,427	+				-2.7
307,427	+				-1.3
307,467	+				-0.9
307,468	-				-1.2
307,471	+				-0.7
307,471	+				-0.3
307,471	+				+1.2
307,472	-				+0.2
307,472	-				-0.2
307,472	-				-0.4
307,978	+		BPHYT_RS01345	0.66	-0.5
307,978	+		BPHYT_RS01345	0.66	+1.3
307,979	-		BPHYT_RS01345	0.66	-1.1
308,137	+		BPHYT_RS01345	0.86	+0.1
308,225	-				-0.6
308,251	+				+0.0
308,252	-				-0.1
308,252	-				+0.2
308,296	+				+1.3
308,296	+				-1.8
308,296	+				-0.0
308,297	-				-0.8
308,301	+				-0.8
308,301	+				-0.2
308,301	+				+0.1
308,301	+				+2.3
308,302	-				-0.4