Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS35340

Experiment: Rhizosphere from sorghum RTx_430 plants, grown 2 months, low phosphate; Rep 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Rhizosphere from sorghum RTx_430 plants, grown 2 months, low phosphate; Rep 1
3,527,187	+		BPHYT_RS35335	0.44	+1.1
3,527,187	+		BPHYT_RS35335	0.44	-0.6
3,527,291	-		BPHYT_RS35335	0.53	+0.8
3,527,697	+				-0.3
3,527,833	+				-1.3
3,527,845	+				+0.6
3,527,846	-				+0.9
3,528,015	+		BPHYT_RS35340	0.30	-1.0
3,528,066	+		BPHYT_RS35340	0.39	-0.7
3,528,236	-		BPHYT_RS35340	0.68	-0.4
3,528,361	-		BPHYT_RS35340	0.89	-1.5
3,528,604	+		BPHYT_RS35345	0.13	-0.7
3,529,399	-		BPHYT_RS35345	0.70	+0.3