Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS35085

Experiment: Rhizosphere from sorghum RTx_430 plants, grown 2 months, low phosphate; Rep 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Rhizosphere from sorghum RTx_430 plants, grown 2 months, low phosphate; Rep 1
3,472,245	-		BPHYT_RS35080	0.45	-0.4
3,472,260	-		BPHYT_RS35080	0.47	+0.9
3,472,445	+		BPHYT_RS35080	0.69	-1.2
3,472,812	+				+0.5
3,472,812	+				-1.2
3,472,812	+				-2.6
3,472,812	+				+0.9
3,472,812	+				-1.0
3,473,215	+		BPHYT_RS35085	0.35	+0.2
3,473,573	+		BPHYT_RS35085	0.73	+1.7
3,473,901	+				-0.7
3,474,001	-				+0.3
3,474,366	-		BPHYT_RS35090	0.35	+0.3
3,474,505	-		BPHYT_RS35090	0.46	+0.5