Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS34920

Experiment: Rhizosphere from sorghum RTx_430 plants, grown 2 months, low phosphate; Rep 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Rhizosphere from sorghum RTx_430 plants, grown 2 months, low phosphate; Rep 1
3,435,545	+				-1.5
3,435,907	+				+0.1
3,435,907	+				-0.6
3,436,148	+				+0.5
3,436,486	-		BPHYT_RS34920	0.39	+0.7
3,436,795	-		BPHYT_RS34920	0.70	+0.2
3,437,118	-				+0.4
3,437,279	-				-0.7
3,437,293	+		BPHYT_RS34925	0.11	-2.6
3,437,293	+		BPHYT_RS34925	0.11	-0.1
3,437,294	-		BPHYT_RS34925	0.11	+0.3
3,437,294	-		BPHYT_RS34925	0.11	+1.9
3,437,321	-		BPHYT_RS34925	0.14	-2.1
3,437,397	-		BPHYT_RS34925	0.21	-0.4
3,437,432	-		BPHYT_RS34925	0.24	-1.2
3,437,558	-		BPHYT_RS34925	0.36	+0.3
3,437,668	+		BPHYT_RS34925	0.46	-0.6
3,437,672	+		BPHYT_RS34925	0.46	-2.1
3,437,673	-		BPHYT_RS34925	0.46	+1.5
3,437,673	-		BPHYT_RS34925	0.46	+1.3
3,437,673	-		BPHYT_RS34925	0.46	-1.1
3,437,842	+		BPHYT_RS34925	0.62	+1.2
3,437,842	+		BPHYT_RS34925	0.62	-1.8
3,437,861	-		BPHYT_RS34925	0.64	-1.5
3,438,007	+		BPHYT_RS34925	0.77	-0.0