Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS34680

Experiment: Rhizosphere from sorghum RTx_430 plants, grown 2 months, low phosphate; Rep 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Rhizosphere from sorghum RTx_430 plants, grown 2 months, low phosphate; Rep 1
3,387,053	+				+0.3
3,387,495	+				-2.3
3,387,708	-		BPHYT_RS34680	0.18	-0.1
3,387,718	-		BPHYT_RS34680	0.22	+0.7
3,387,975	-				-0.7
3,388,119	+				+0.2
3,388,150	-				+0.9
3,388,216	+				-0.1
3,388,216	+				+0.1
3,388,373	+				-1.1
3,388,374	-				+0.1
3,388,752	-				-0.6
3,388,786	+				-0.9
3,388,787	-				-1.9