Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS34360

Experiment: Rhizosphere from sorghum RTx_430 plants, grown 2 months, low phosphate; Rep 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Rhizosphere from sorghum RTx_430 plants, grown 2 months, low phosphate; Rep 1
3,315,011	-		BPHYT_RS34355	0.85	-0.0
3,315,011	-		BPHYT_RS34355	0.85	-3.5
3,315,011	-		BPHYT_RS34355	0.85	-0.1
3,315,011	-		BPHYT_RS34355	0.85	-0.1
3,315,011	-		BPHYT_RS34355	0.85	+0.0
3,315,021	+		BPHYT_RS34355	0.85	-0.4
3,315,094	+		BPHYT_RS34355	0.87	-0.3
3,315,201	+				+1.1
3,315,228	+				-0.7
3,315,228	+				+0.4
3,315,229	-				-1.4
3,315,265	+				-1.4
3,315,269	-				-0.6
3,315,396	+				-1.2
3,315,396	+				-0.1
3,315,397	-				+0.3
3,315,454	+				+0.1
3,315,455	-				-1.0
3,315,626	-				+0.3
3,315,640	+				-1.7
3,315,641	-				-0.2
3,315,641	-				+1.1
3,315,720	-				+0.3
3,315,808	-				+9.0
3,315,808	-				+3.6
3,315,821	-				+0.8
3,315,832	-				+3.2
3,315,883	+				-0.4
3,315,978	+				+6.5
3,315,978	+				-0.1
3,315,978	+				+0.7
3,316,126	+		BPHYT_RS34360	0.16	+0.7
3,316,126	+		BPHYT_RS34360	0.16	+1.9
3,316,126	+		BPHYT_RS34360	0.16	-1.1
3,316,181	-		BPHYT_RS34360	0.19	-0.2
3,316,238	-		BPHYT_RS34360	0.23	+0.9
3,316,651	+		BPHYT_RS34360	0.47	-0.5
3,316,652	-		BPHYT_RS34360	0.47	+0.7
3,317,584	+				+0.6
3,317,646	+				-0.0
3,317,660	-				+0.2
3,317,868	+				-1.9
3,317,868	+				+1.1
3,317,869	-				-0.5
3,317,874	-				-0.8
3,318,164	-		BPHYT_RS34365	0.32	+1.4
3,318,167	-		BPHYT_RS34365	0.33	+0.9
3,318,167	-		BPHYT_RS34365	0.33	+0.2
3,318,167	-		BPHYT_RS34365	0.33	+0.4
3,318,381	-		BPHYT_RS34365	0.68	+0.4
3,318,381	-		BPHYT_RS34365	0.68	+0.7