Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS34045

Experiment: Rhizosphere from sorghum RTx_430 plants, grown 2 months, low phosphate; Rep 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Rhizosphere from sorghum RTx_430 plants, grown 2 months, low phosphate; Rep 1
3,238,018	-		BPHYT_RS34040	0.59	-0.6
3,238,728	+				-1.6
3,238,728	+				-1.6
3,238,729	-				+3.3
3,238,742	-				-0.0
3,239,912	-		BPHYT_RS34050	0.28	-1.5
3,240,056	+		BPHYT_RS34050	0.44	-0.6
3,240,125	+		BPHYT_RS34050	0.52	+2.1
3,240,126	-		BPHYT_RS34050	0.52	-1.0
3,240,305	-		BPHYT_RS34050	0.72	-1.0
3,240,566	-				+1.0