Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS34035

Experiment: Rhizosphere from sorghum RTx_430 plants, grown 2 months, low phosphate; Rep 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Rhizosphere from sorghum RTx_430 plants, grown 2 months, low phosphate; Rep 1
3,234,567	-		BPHYT_RS34030	0.45	+0.0
3,234,569	-		BPHYT_RS34030	0.45	+0.7
3,234,740	-		BPHYT_RS34030	0.61	+0.4
3,234,858	+		BPHYT_RS34030	0.72	+1.6
3,235,099	+				-2.5
3,235,901	-		BPHYT_RS34035	0.42	+1.0
3,236,157	+		BPHYT_RS34035	0.57	+3.5
3,236,235	+		BPHYT_RS34035	0.62	+1.7
3,236,999	+				+0.6
3,236,999	+				+0.0
3,237,000	-				+2.3
3,237,003	+				-0.5
3,237,061	+				+2.0
3,237,062	-				+0.8
3,237,411	+		BPHYT_RS34040	0.27	-0.3
3,237,412	-		BPHYT_RS34040	0.27	-0.1