Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS33020

Experiment: Rhizosphere from sorghum RTx_430 plants, grown 2 months, low phosphate; Rep 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Rhizosphere from sorghum RTx_430 plants, grown 2 months, low phosphate; Rep 1
2,984,978	-		BPHYT_RS33010	0.27	-1.0
2,985,353	-				-1.2
2,985,422	+				-0.2
2,985,697	+		BPHYT_RS33015	0.47	+1.0
2,986,236	-		BPHYT_RS33020	0.35	-1.7
2,986,679	+				+1.1
2,986,680	-				-0.3
2,986,680	-				+0.0
2,986,884	+				-0.6
2,986,885	-				-0.1
2,987,001	-				+1.2
2,987,077	-				+0.5
2,987,148	+				-0.4
2,987,215	+				-0.4
2,987,215	+				+1.6
2,987,299	+				+0.7
2,987,369	+		BPHYT_RS33025	0.13	-0.1