Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS32875

Experiment: Rhizosphere from sorghum RTx_430 plants, grown 2 months, low phosphate; Rep 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Rhizosphere from sorghum RTx_430 plants, grown 2 months, low phosphate; Rep 1
2,954,006	-				+0.1
2,954,414	+		BPHYT_RS32870	0.26	+0.1
2,954,524	-		BPHYT_RS32870	0.51	-2.0
2,954,660	+		BPHYT_RS32870	0.81	+0.6
2,954,773	+				-2.5
2,955,416	-		BPHYT_RS32875	0.57	+2.4
2,955,419	+		BPHYT_RS32875	0.58	-0.0
2,955,806	-				-1.4
2,956,257	-		BPHYT_RS32880	0.82	-1.6
2,956,283	-		BPHYT_RS32880	0.86	-2.0
2,956,361	-				+0.3