Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS32530

Experiment: Rhizosphere from sorghum RTx_430 plants, grown 2 months, low phosphate; Rep 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Rhizosphere from sorghum RTx_430 plants, grown 2 months, low phosphate; Rep 1
2,869,140	+				+1.2
2,869,186	+				+0.3
2,869,206	-				-1.0
2,869,232	+				-0.2
2,869,233	-				-0.1
2,869,233	-				+1.0
2,869,340	-		BPHYT_RS32525	0.26	-1.2
2,869,408	+		BPHYT_RS32525	0.40	-1.0
2,869,641	-				+0.5
2,869,670	-				+2.6
2,869,670	-				-1.1
2,869,673	+				+0.3
2,869,866	-				-1.6
2,869,889	+				-1.6
2,869,900	+				-0.2
2,869,979	+				+2.1
2,870,030	+				+0.2
2,870,241	-		BPHYT_RS32530	0.20	+0.5
2,870,558	+		BPHYT_RS32530	0.40	-1.1
2,870,575	+		BPHYT_RS32530	0.41	-1.0
2,870,640	-		BPHYT_RS32530	0.45	-1.0
2,870,690	+		BPHYT_RS32530	0.48	-1.0
2,870,690	+		BPHYT_RS32530	0.48	+1.0
2,870,919	+		BPHYT_RS32530	0.63	-0.2
2,870,919	+		BPHYT_RS32530	0.63	+0.6
2,871,366	-				+0.3
2,871,502	-				-1.4
2,871,592	+		BPHYT_RS32535	0.19	+0.7
2,871,646	+		BPHYT_RS32535	0.34	-0.8
2,871,646	+		BPHYT_RS32535	0.34	-0.6
2,871,746	+		BPHYT_RS32535	0.63	-0.9
2,871,845	+				-0.3
2,871,845	+				-0.6
2,871,846	-				-0.7
2,871,846	-				-0.5
2,872,082	+				-2.4
2,872,267	-		BPHYT_RS32540	0.79	-0.9
2,872,370	+				-2.6