Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS32390

Experiment: Rhizosphere from sorghum RTx_430 plants, grown 2 months, low phosphate; Rep 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Rhizosphere from sorghum RTx_430 plants, grown 2 months, low phosphate; Rep 1
2,838,669	+				-0.2
2,838,669	+				+0.3
2,838,669	+				-0.6
2,838,909	+				+0.8
2,838,910	-				+0.2
2,838,928	+				+0.4
2,838,928	+				-2.7
2,838,929	-				+0.0
2,839,160	+				-2.3
2,839,161	-				-0.0
2,839,228	+				+0.0
2,839,229	-				+1.4
2,839,303	+				+1.0
2,839,304	-				+1.3
2,839,304	-				+0.2
2,839,304	-				+0.2
2,839,602	+				-1.4
2,839,603	-				-0.3
2,839,657	+				+0.5
2,839,680	-				-0.2
2,839,773	-		BPHYT_RS32390	0.20	-0.2
2,839,836	-		BPHYT_RS32390	0.31	-1.1
2,840,008	+		BPHYT_RS32390	0.60	-1.6
2,840,086	+		BPHYT_RS32390	0.73	-1.7
2,840,087	-		BPHYT_RS32390	0.73	+0.4
2,840,207	+				-1.0
2,840,208	-				-1.3
2,840,247	+				-1.9
2,840,260	-				+1.2
2,840,316	-				-1.0
2,840,324	-				+0.9
2,840,374	-				-0.6
2,840,416	+				+1.0
2,840,429	+				-0.4
2,840,530	+		BPHYT_RS32395	0.34	-1.2
2,840,679	+				-0.0
2,840,688	-				+1.0
2,840,889	+				+0.3
2,840,907	-				-2.2
2,841,069	-				-0.1
2,841,113	-				-0.1