Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS31605

Experiment: Rhizosphere from sorghum RTx_430 plants, grown 2 months, low phosphate; Rep 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Rhizosphere from sorghum RTx_430 plants, grown 2 months, low phosphate; Rep 1
2,641,075	+		BPHYT_RS31600	0.40	-0.1
2,641,075	+		BPHYT_RS31600	0.40	+0.4
2,641,817	-		BPHYT_RS31605	0.24	-0.6
2,641,971	+		BPHYT_RS31605	0.32	-1.1
2,642,272	+		BPHYT_RS31605	0.49	+0.1
2,642,273	-		BPHYT_RS31605	0.49	-0.2
2,642,884	-		BPHYT_RS31605	0.83	+0.2
2,643,100	-				+0.4
2,643,244	-				+1.7
2,643,452	-		BPHYT_RS31610	0.21	-0.6
2,643,452	-		BPHYT_RS31610	0.21	+0.5