Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS31510

Experiment: Rhizosphere from sorghum RTx_430 plants, grown 2 months, low phosphate; Rep 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Rhizosphere from sorghum RTx_430 plants, grown 2 months, low phosphate; Rep 1
2,621,062	+				-0.0
2,621,351	-				+2.2
2,621,351	-				+0.5
2,621,462	+				-0.7
2,621,510	-				-0.4
2,621,545	+				+0.3
2,621,788	-				+0.2
2,622,333	-		BPHYT_RS31510	0.20	+0.0
2,622,433	+		BPHYT_RS31510	0.27	-0.9
2,622,602	+		BPHYT_RS31510	0.39	+0.2
2,623,264	+		BPHYT_RS31510	0.88	-0.8
2,623,409	+				-1.0
2,623,409	+				+0.5
2,623,522	+				+0.9
2,623,612	-				+0.2
2,624,089	+		BPHYT_RS31515	0.32	+2.9
2,624,228	-		BPHYT_RS31515	0.46	+0.9
2,624,256	+		BPHYT_RS31515	0.49	+0.5
2,624,409	-		BPHYT_RS31515	0.64	+1.5