Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS31505

Experiment: Rhizosphere from sorghum RTx_430 plants, grown 2 months, low phosphate; Rep 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Rhizosphere from sorghum RTx_430 plants, grown 2 months, low phosphate; Rep 1
2,619,681	-				+0.5
2,619,830	+		BPHYT_RS31495	0.42	+0.1
2,619,882	+		BPHYT_RS31495	0.59	+0.6
2,619,882	+		BPHYT_RS31495	0.59	-1.0
2,619,986	+				-0.6
2,620,059	+				+1.1
2,620,060	-				-0.6
2,620,315	+				-1.6
2,620,530	+		BPHYT_RS31505	0.34	+0.5
2,620,530	+		BPHYT_RS31505	0.34	+0.3
2,620,531	-		BPHYT_RS31505	0.34	+1.9
2,620,830	+		BPHYT_RS31505	0.73	-0.6
2,620,962	-				-0.1
2,620,962	-				-0.2
2,621,062	+				-0.0
2,621,351	-				+2.2
2,621,351	-				+0.5
2,621,462	+				-0.7
2,621,510	-				-0.4
2,621,545	+				+0.3
2,621,788	-				+0.2