Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS31300

Experiment: Rhizosphere from sorghum RTx_430 plants, grown 2 months, low phosphate; Rep 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Rhizosphere from sorghum RTx_430 plants, grown 2 months, low phosphate; Rep 1
2,580,451	+		BPHYT_RS31295	0.57	+3.3
2,580,451	+		BPHYT_RS31295	0.57	+0.6
2,580,452	-		BPHYT_RS31295	0.57	-0.1
2,580,452	-		BPHYT_RS31295	0.57	-0.7
2,580,629	-		BPHYT_RS31295	0.84	+0.4
2,580,629	-		BPHYT_RS31295	0.84	+0.3
2,580,700	-				-2.7
2,580,815	+				+0.1
2,580,815	+				-1.2
2,580,933	-				-2.0
2,581,313	+				-3.0
2,581,519	-		BPHYT_RS31300	0.18	-3.3
2,581,643	-		BPHYT_RS31300	0.34	-0.6
2,581,765	-		BPHYT_RS31300	0.49	-2.0
2,582,677	-		BPHYT_RS31305	0.43	-0.5
2,582,732	+		BPHYT_RS31305	0.49	+2.3