Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS31185

Experiment: Rhizosphere from sorghum RTx_430 plants, grown 2 months, low phosphate; Rep 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Rhizosphere from sorghum RTx_430 plants, grown 2 months, low phosphate; Rep 1
2,554,142	-				-0.5
2,554,157	-				+1.0
2,554,194	-				+2.8
2,554,198	+				+1.0
2,554,198	+				-1.6
2,554,199	-				+0.7
2,554,390	+		BPHYT_RS31185	0.11	+1.8
2,554,390	+		BPHYT_RS31185	0.11	-1.0
2,554,687	+		BPHYT_RS31185	0.44	-0.6
2,554,809	-		BPHYT_RS31185	0.57	+0.7
2,554,809	-		BPHYT_RS31185	0.57	-1.2
2,554,809	-		BPHYT_RS31185	0.57	-0.0
2,555,220	-				+1.0
2,555,220	-				-0.1
2,555,220	-				+0.4
2,555,220	-				-1.0
2,555,408	+				+1.3
2,555,530	+		BPHYT_RS31190	0.19	+0.8
2,555,531	-		BPHYT_RS31190	0.20	-1.5
2,555,531	-		BPHYT_RS31190	0.20	-1.3
2,555,670	-		BPHYT_RS31190	0.34	-1.5
2,555,670	-		BPHYT_RS31190	0.34	-1.0
2,555,996	-		BPHYT_RS31190	0.67	-0.2