Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS30260

Experiment: Rhizosphere from sorghum RTx_430 plants, grown 2 months, low phosphate; Rep 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Rhizosphere from sorghum RTx_430 plants, grown 2 months, low phosphate; Rep 1
2,342,548	+		BPHYT_RS30255	0.35	+0.1
2,342,549	-		BPHYT_RS30255	0.35	-0.9
2,342,551	+		BPHYT_RS30255	0.36	+1.1
2,342,977	+				-0.0
2,343,003	+				+0.1
2,343,199	+		BPHYT_RS30260	0.54	-0.7
2,343,202	+		BPHYT_RS30260	0.55	+0.0
2,343,203	-		BPHYT_RS30260	0.55	-0.5
2,343,203	-		BPHYT_RS30260	0.55	+1.0
2,343,253	+		BPHYT_RS30260	0.71	-0.6
2,343,395	-				+0.4
2,343,751	-		BPHYT_RS30265	0.69	+0.0
2,343,885	-				-1.7
2,343,885	-				+2.7
2,343,950	-				+1.1
2,343,966	+				-0.3
2,344,001	+				-0.6
2,344,002	-				+0.0
2,344,074	-				+0.0
2,344,244	+				-0.3