Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS30095

Experiment: Rhizosphere from sorghum RTx_430 plants, grown 2 months, low phosphate; Rep 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Rhizosphere from sorghum RTx_430 plants, grown 2 months, low phosphate; Rep 1
2,305,606	+		BPHYT_RS30090	0.46	-3.0
2,305,606	+		BPHYT_RS30090	0.46	-0.5
2,305,607	-		BPHYT_RS30090	0.46	-0.0
2,305,608	+		BPHYT_RS30090	0.47	+0.3
2,305,609	-		BPHYT_RS30090	0.47	+0.5
2,306,046	-		BPHYT_RS30090	0.74	+0.2
2,306,107	-		BPHYT_RS30090	0.78	-0.2
2,306,555	-				+1.9
2,307,005	+				+0.1
2,307,006	-				+0.3
2,307,056	+				-1.5
2,307,770	+		BPHYT_RS30100	0.61	-0.6