Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS30085

Experiment: Rhizosphere from sorghum RTx_430 plants, grown 2 months, low phosphate; Rep 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Rhizosphere from sorghum RTx_430 plants, grown 2 months, low phosphate; Rep 1
2,302,857	+		BPHYT_RS30075	0.75	+0.4
2,302,858	-		BPHYT_RS30075	0.75	+0.4
2,303,549	+		BPHYT_RS30080	0.75	-0.8
2,303,717	+				+0.1
2,303,758	-				+1.3
2,303,899	-		BPHYT_RS30085	0.12	-1.2
2,303,899	-		BPHYT_RS30085	0.12	+1.8
2,304,793	-				+3.4
2,305,002	-				+0.2
2,305,606	+		BPHYT_RS30090	0.46	-3.0
2,305,606	+		BPHYT_RS30090	0.46	-0.5
2,305,607	-		BPHYT_RS30090	0.46	-0.0
2,305,608	+		BPHYT_RS30090	0.47	+0.3
2,305,609	-		BPHYT_RS30090	0.47	+0.5