Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS30035

Experiment: Rhizosphere from sorghum RTx_430 plants, grown 2 months, low phosphate; Rep 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Rhizosphere from sorghum RTx_430 plants, grown 2 months, low phosphate; Rep 1
2,293,455	-		BPHYT_RS30030	0.27	-0.4
2,293,559	-		BPHYT_RS30030	0.36	-1.7
2,293,559	-		BPHYT_RS30030	0.36	+0.9
2,293,686	+		BPHYT_RS30030	0.48	+0.4
2,293,686	+		BPHYT_RS30030	0.48	-1.3
2,293,727	-		BPHYT_RS30030	0.51	+0.7
2,294,120	-		BPHYT_RS30030	0.87	-0.9
2,294,264	+				+0.8
2,294,265	-				-0.4
2,294,378	+				-0.4
2,294,958	-				-0.2
2,294,977	-				-0.7
2,295,418	-		BPHYT_RS30040	0.79	-0.9
2,295,618	+				-0.5
2,295,918	+				+0.1
2,295,918	+				+0.6
2,295,919	-				-0.6