Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS29520

Experiment: Rhizosphere from sorghum RTx_430 plants, grown 2 months, low phosphate; Rep 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Rhizosphere from sorghum RTx_430 plants, grown 2 months, low phosphate; Rep 1
2,173,259	-		BPHYT_RS29515	0.62	-0.9
2,173,320	+		BPHYT_RS29515	0.67	+1.2
2,173,837	-				+0.1
2,173,905	-				+1.2
2,174,185	+				+0.2
2,174,382	-		BPHYT_RS29520	0.76	+0.9
2,174,441	-				+0.2
2,174,449	+				-1.7
2,174,533	-				-0.5
2,174,597	+				+0.6
2,174,633	+				+0.2
2,174,633	+				+0.6
2,174,634	-				+0.6
2,174,641	-				+0.7
2,174,693	+				+0.4
2,174,805	+				+0.4
2,174,818	+				+0.1
2,175,274	+		BPHYT_RS29525	0.57	+0.7