Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS28350

Experiment: Rhizosphere from sorghum RTx_430 plants, grown 2 months, low phosphate; Rep 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Rhizosphere from sorghum RTx_430 plants, grown 2 months, low phosphate; Rep 1
1,912,147	-				-1.2
1,912,493	+		BPHYT_RS28345	0.45	-0.3
1,912,493	+		BPHYT_RS28345	0.45	-2.5
1,912,836	+		BPHYT_RS28345	0.89	-1.4
1,912,836	+		BPHYT_RS28345	0.89	-2.3
1,912,837	-		BPHYT_RS28345	0.89	-2.7
1,913,512	-		BPHYT_RS28350	0.46	-1.5
1,913,698	-		BPHYT_RS28350	0.66	-1.8
1,913,917	+		BPHYT_RS28350	0.89	-1.1
1,913,974	+				+0.7
1,913,974	+				-0.1
1,914,097	+				-1.2