Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS27865

Experiment: Rhizosphere from sorghum RTx_430 plants, grown 2 months, low phosphate; Rep 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Rhizosphere from sorghum RTx_430 plants, grown 2 months, low phosphate; Rep 1
1,812,909	+				+0.4
1,813,079	+				+0.3
1,813,298	-				-0.2
1,813,537	-		BPHYT_RS27860	0.48	-1.5
1,814,076	-				-1.2
1,814,118	-				+0.6
1,814,447	+		BPHYT_RS27865	0.22	-2.1
1,814,448	-		BPHYT_RS27865	0.22	+10.0
1,817,330	+		BPHYT_RS27875	0.24	+2.2
1,817,331	-		BPHYT_RS27875	0.24	+1.1
1,817,382	-		BPHYT_RS27875	0.35	+0.6