Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS27625

Experiment: Rhizosphere from sorghum RTx_430 plants, grown 2 months, low phosphate; Rep 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Rhizosphere from sorghum RTx_430 plants, grown 2 months, low phosphate; Rep 1
1,766,060	+				-2.0
1,766,111	+				-0.8
1,766,411	+		BPHYT_RS27620	0.57	+1.9
1,766,563	+				+0.7
1,766,712	+		BPHYT_RS27625	0.21	+0.5
1,766,714	+		BPHYT_RS27625	0.21	-1.2
1,767,098	-		BPHYT_RS27625	0.80	-0.1
1,767,249	+				-1.2
1,767,381	-				+0.0
1,767,592	+				+0.6
1,768,015	-		BPHYT_RS27635	0.18	-1.7
1,768,073	-		BPHYT_RS27635	0.23	-1.6